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Analytical Tools & Bioinformatics

BioTools: UNIX tutorial, primer design, and essential tools
http://biotools.umassmed.edu

The WIKI and NextGen Sequencing User Guides
http://wiki.umassmed.edu/rc/wiki/index.php/Main_Page
http://biotools.umassmed.edu/BioCore/nextgen/

GMOD: Generic Model Organism Database
http://gmod.org/wiki/Main_Page

Open source software GenomeBrowse
http://gmod.org/wiki/GBrowse

Illumina (Solexa) Data Analysis, presentation by Dr. David Lapointe, 20 Mar 2008 - please note some links are out of date! ( get it )

Short-Read Sequence Alignment Software List
http://en.wikipedia.org/wiki/Sequence_alignment_software#Short-Read_Sequence_Alignment

Other Things and Stuff:

Gene Expression Omnibus at NIH

UMMS PacBio Core logo linking to website

UMMS Molecular Biology Core Labs logo linking to website